4EOT Crystal structure of the MafA homodimer bound to the consensus MARE date 2012-04-15
authors Lu, X., Guanga, G., Wan, C., Rose, R.B.
compound source
symmetry
R_factor
R_Free 0.2595
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.85
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceA Novel DNA Binding Mechanism for maf Basic Region-Leucine Zipper Factors Inferred from a MafA-DNA Complex Structure and Binding Specificities., Lu X, Guanga GP, Wan C, Rose RB, Biochemistry. 2012 Nov 20. PMID:23148532
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (4eot.pdb1.gz) 91 Kb
  • LPC: Ligand-Protein Contacts for 4EOT
  • CSU: Contacts of Structural Units for 4EOT
  • Structure Factors (113 Kb)
  • Retrieve 4EOT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4EOT from S2C, [Save to disk]
  • Re-refined 4eot structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4EOT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4EOT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4EOT, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4eot_A] [4eot_C] [4eot_B] [4eot_D] [4eot]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4EOT: [BRLZ ] by SMART
  • Other resources with information on 4EOT
  • Community annotation for 4EOT at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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