4ESR Protein Binding date Apr 23, 2012
title Molecular And Structural Characterization Of The Sh3 Domain In Regulation Of Cellular Resistance Of Bcr-Abl+ Chronic My Leukemia Cells To Tyrosine Kinase Inhibitors
authors X.F.Van Petegem, P.X.Liu, P.Lobo, X.Jiang
compound source
Molecule: Jouberin
Chain: A, B
Fragment: Ahi-1 Sh3 Domain (Unp Residues 1048-1116)
Synonym: Abelson Helper Integration Site 1 Protein Homolog,
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ahi1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.124 R_Free 0.139
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.142 68.142 98.489 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.53 Å
ligand PEG enzyme
Primary referenceMolecular and structural characterization of the SH3 domain of AHI-1 in regulation of cellular resistance of BCR-ABL(+) chronic myeloid leukemia cells To tyrosine kinase inhibitors., Liu X, Chen M, Lobo P, An J, Grace Cheng SW, Moradian A, Morin GB, Van Petegem F, Jiang X, Proteomics. 2012 May 24. doi: 10.1002/pmic.201100553. PMID:22623184
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (4esr.pdb1.gz) 29 Kb
  • Biological Unit Coordinates (4esr.pdb2.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 4ESR
  • CSU: Contacts of Structural Units for 4ESR
  • Structure Factors (737 Kb)
  • Retrieve 4ESR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ESR from S2C, [Save to disk]
  • Re-refined 4esr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ESR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ESR
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4ESR, from MSDmotif at EBI
  • Fold representative 4esr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4esr_A] [4esr_B] [4esr]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4ESR: [SH3 ] by SMART
  • Other resources with information on 4ESR
  • Community annotation for 4ESR at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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