4ET0 Crystal structure of circularly permuted human asparaginase-like protein 1 date 2012-04-23
authors Li, W.Z., Yogesha, S.D., Zhang, Y.
compound source
symmetry
R_factor
R_Free 0.2486
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.30
ligand NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceUncoupling Intramolecular Processing and Substrate Hydrolysis in the N-Terminal Nucleophile Hydrolase hASRGL1 by Circular Permutation., Li W, Cantor JR, Yogesha SD, Yang S, Chantranupong L, Liu JQ, Agnello G, Georgiou G, Stone EM, Zhang Y, ACS Chem Biol. 2012 Aug 29. PMID:22891768
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (187 Kb) [Save to disk]
  • Biological Unit Coordinates (4et0.pdb1.gz) 181 Kb
  • LPC: Ligand-Protein Contacts for 4ET0
  • CSU: Contacts of Structural Units for 4ET0
  • Structure Factors (282 Kb)
  • Retrieve 4ET0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ET0 from S2C, [Save to disk]
  • Re-refined 4et0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ET0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ET0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ET0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4et0_B] [4et0] [4et0_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4ET0
  • Community annotation for 4ET0 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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