4EWR X-ray structure of WDR5-SETd1a Win motif peptide binary complex date
authors Dharmarajan, V., Lee, J.H., Patel, A., Skalnik, D.G., Cosgrove, M.S.
compound source
symmetry
R_factor
R_Free 0.1978
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for WDR5 interaction (Win) motif recognition in human SET1 family histone methyltransferases., Dharmarajan V, Lee JH, Patel A, Skalnik DG, Cosgrove MS, J Biol Chem. 2012 Aug 10;287(33):27275-89. Epub 2012 Jun 3. PMID:22665483
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (4ewr.pdb1.gz) 54 Kb
  • CSU: Contacts of Structural Units for 4EWR
  • Structure Factors (1129 Kb)
  • Retrieve 4EWR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4EWR from S2C, [Save to disk]
  • Re-refined 4ewr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4EWR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4EWR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4EWR, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ewr_C] [4ewr_A] [4ewr]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4EWR: [WD40 ] by SMART
    • Other resources with information on 4EWR
  • Community annotation for 4EWR at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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