| Data retrieval |
- Asymmetric unit, PDB entry:
[header only] [complete with coordinates] (37 Kb) [Save to disk]
 - Biological Unit Coordinates (4f8d.pdb1.gz) 32 Kb
- Biological Unit Coordinates (4f8d.pdb2.gz) 32 Kb
- LPC: Ligand-Protein Contacts for 4F8D
- CSU: Contacts of Structural Units for 4F8D
- Structure Factors (397 Kb)
- Retrieve 4F8D in mmCIF format [Save to disk]
- SEQRES to COORDINATES
correlation for 4F8D
from S2C,
[Save to disk]
- Re-refined 4f8d structure
from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
|
| View 4F8D in 3D |
-
Proteopedia, because life has more than 2D.
- On Jmol, a nice Rasmol like molecule viewer.
This is good for easiest viewing of basic structure.
- On FirstGlance, an
excellent tool for a guided tour on the structure components, by
E. Martz.
|
| Visual 3D analysis of 4F8D |
- Cartoon
representation from PDB Cartoon
- Ramachandran
plot from PDBSum
|
| Structure-derived information |
- Electron Density
related parameters from EDS Electron Density Server, at Upsala
- Dipole moment, from Dipole Server at Weizmann Institute
- Crystal Contacts, from CryCo at Weizmann Institute
- 3D motif for 4F8D,
from MSDmotif at EBI
- Fold representative 4f8d from FSSP and Dali (Families of Structurally Similar Proteins)
|
| Sequence-derived information |
- View one-letter amino acid or nucleotide sequence for each chain: [4f8d] [4f8d_B] [4f8d_A]
- SWISS-PROT database:
- Domain organization of by SWISSPFAM
- Domain found in 4F8D: [HTH_XRE
] by SMART
|
|
Other resources with information on 4F8D |
- Community annotation for 4F8D at PDBWiki (http://pdbwiki.org)
|
|
