4FIJ Catalytic domain of human PAK4 date 2012-06-08
authors Ha, B.H., Boggon, T.J.
compound source
symmetry
R_factor
R_Free 0.27087
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand SEP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceType II p21-activated kinases (PAKs) are regulated by an autoinhibitory pseudosubstrate., Ha BH, Davis MJ, Chen C, Lou HJ, Gao J, Zhang R, Krauthammer M, Halaban R, Schlessinger J, Turk BE, Boggon TJ, Proc Natl Acad Sci U S A. 2012 Sep 17. PMID:22988085
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (4fij.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 4FIJ
  • CSU: Contacts of Structural Units for 4FIJ
  • Structure Factors (218 Kb)
  • Retrieve 4FIJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FIJ from S2C, [Save to disk]
  • Re-refined 4fij structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4FIJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4FIJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FIJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fij] [4fij_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4FIJ: [S_TKc ] by SMART
    • Other resources with information on 4FIJ
  • Community annotation for 4FIJ at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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