4FLB CID of human RPRD2 date 2012-06-14
authors Ni, Z., Xu, C., Tempel, W., Bakkouri, M.El., Loppnau, P., Guo, X., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Greenblatt, J.F., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.2162
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand PR, SO4, UNX enzyme
Primary referenceRPRD1A and RPRD1B are human RNA polymerase II C-terminal domain scaffolds for Ser5 dephosphorylation., Ni Z, Xu C, Guo X, Hunter GO, Kuznetsova OV, Tempel W, Marcon E, Zhong G, Guo H, Kuo WH, Li J, Young P, Olsen JB, Wan C, Loppnau P, El Bakkouri M, Senisterra GA, He H, Huang H, Sidhu SS, Emili A, Murphy S, Mosley AL, Arrowsmith CH, Min J, Greenblatt JF, Nat Struct Mol Biol. 2014 Jul 6. doi: 10.1038/nsmb.2853. PMID:24997600
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (4flb.pdb1.gz) 93 Kb
  • LPC: Ligand-Protein Contacts for 4FLB
  • CSU: Contacts of Structural Units for 4FLB
  • Structure Factors (1483 Kb)
  • Retrieve 4FLB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FLB from S2C, [Save to disk]
  • Re-refined 4flb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4FLB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4FLB
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FLB, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4flb] [4flb_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4FLB: [RPR ] by SMART
    • Other resources with information on 4FLB
  • Community annotation for 4FLB at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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