4FLP Crystal Structure of the first bromodomain of human BRDT in complex with the inhibitor JQ1 date 2012-06-15
authors Filippakopoulos, P., Picaud, S., Qi, J., Felletar, I., Canning, P., Muniz, J., Delft, F.von., Bountra, C., Arrowsmith, C.H., Edwards, A., Bradner, J., Knapp, S., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.25487
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.23
ligand JQ1, K enzyme
Primary referenceSmall-Molecule Inhibition of BRDT for Male Contraception., Matzuk MM, McKeown MR, Filippakopoulos P, Li Q, Ma L, Agno JE, Lemieux ME, Picaud S, Yu RN, Qi J, Knapp S, Bradner JE, Cell. 2012 Aug 17;150(4):673-684. PMID:22901802
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk]
  • Biological Unit Coordinates (4flp.pdb1.gz) 39 Kb
  • Biological Unit Coordinates (4flp.pdb2.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 4FLP
  • CSU: Contacts of Structural Units for 4FLP
  • Structure Factors (494 Kb)
  • Retrieve 4FLP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FLP from S2C, [Save to disk]
  • Re-refined 4flp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4FLP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4FLP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FLP, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4flp] [4flp_B] [4flp_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4FLP: [BROMO ] by SMART
    • Other resources with information on 4FLP
  • Community annotation for 4FLP at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science