4FRS	Structure of BACE in complex with (S)-4-(3-chloro-5-(5-(prop-1-yn-1-yl)pyridin-3-yl)thiophen-2-yl)-1,4-dimethyl-6-oxotetrahydropyrimidin-2(1H)-iminium	date	2012-06-26
authors	Orth, P.
compound		source
symmetry		R_factor R_Free 0.2280
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.70
ligand	0V6 BindingDB	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Discovery of an Orally Available, Brain Penetrant BACE1 Inhibitor that Affords Robust CNS Abeta Reduction., Stamford AW, Scott JD, Li SW, Babu S, Tadesse D, Hunter R, Wu Y, Misiaszek J, Cumming JN, Gilbert EJ, Huang C, McKittrick BA, Hong L, Guo T, Zhu Z, Strickland C, Orth P, Voigt JH, Kennedy ME, Chen X, Kuvelkar R, Hodgson R, Hyde LA, Cox K, Favreau L, Parker EM, Greenlee WJ, ACS Med Chem Lett. 2012 Nov 8;3(11):897-902. Epub 2012 Jul 12. PMID:23412139

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (146 Kb) [Save to disk] Biological Unit Coordinates (4frs.pdb1.gz) 73 Kb Biological Unit Coordinates (4frs.pdb2.gz) 72 Kb LPC: Ligand-Protein Contacts for 4FRS CSU: Contacts of Structural Units for 4FRS Structure Factors (2039 Kb) Retrieve 4FRS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4FRS from S2C, [Save to disk] Re-refined 4frs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4FRS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4FRS

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4FRS, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4frs] [4frs_B] [4frs_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4FRS

Community annotation for 4FRS at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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