4FVQ Crystal structure of the Jak2 pseudokinase domain (Mg-ATP-bound form) date
authors Bandaranayake, R.M., Hubbard, S.R.
compound source
symmetry
R_factor
R_Free 0.1987
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.75
ligand ACT, ATP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structures of the JAK2 pseudokinase domain and the pathogenic mutant V617F., Bandaranayake RM, Ungureanu D, Shan Y, Shaw DE, Silvennoinen O, Hubbard SR, Nat Struct Mol Biol. 2012 Jul 22. doi: 10.1038/nsmb.2348. PMID:22820988
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (4fvq.pdb1.gz) 90 Kb
  • LPC: Ligand-Protein Contacts for 4FVQ
  • CSU: Contacts of Structural Units for 4FVQ
  • Structure Factors (606 Kb)
  • Retrieve 4FVQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FVQ from S2C, [Save to disk]
  • Re-refined 4fvq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4FVQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4FVQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FVQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fvq] [4fvq_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4FVQ: [STYKc ] by SMART
  • Other resources with information on 4FVQ
  • Community annotation for 4FVQ at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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