4FYH Crystal structure of rcl with phospho-triciribine date 2012-07-04
authors Labesse, G., Padilla, A., Kaminski, P.A.
compound source
symmetry
R_factor
R_Free 0.24645
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.44
ligand SO4, TR5 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructure of the oncoprotein Rcl bound to three nucleotide analogues., Padilla A, Amiable C, Pochet S, Kaminski PA, Labesse G, Acta Crystallogr D Biol Crystallogr. 2013 Feb;69(Pt 2):247-55. doi:, 10.1107/S0907444912045039. Epub 2013 Jan 19. PMID:23385460
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (183 Kb) [Save to disk]
  • Biological Unit Coordinates (4fyh.pdb1.gz) 89 Kb
  • Biological Unit Coordinates (4fyh.pdb2.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 4FYH
  • CSU: Contacts of Structural Units for 4FYH
  • Structure Factors (314 Kb)
  • Retrieve 4FYH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FYH from S2C, [Save to disk]
  • Re-refined 4fyh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4FYH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4FYH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FYH, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fyh_D] [4fyh_A] [4fyh_B] [4fyh] [4fyh_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4FYH
  • Community annotation for 4FYH at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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