OCA Atlas for 4G11

4G11

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

0W7 BindingDB

enzyme

Gene
Ontology

Chain	Function	Process	Component
A

Primary reference

Preparation and optimization of new 4-(morpholin-4-yl)-(6-oxo-1,6-dihydropyrimidin-2-yl)amide derivatives as PI3Kbeta inhibitors., Certal V, Halley F, Virone-Oddos A, Thompson F, Filoche-Romme B, El-Ahmad Y, Carry JC, Delorme C, Karlsson A, Abecassis PY, Vincent L, Bonnevaux H, Nicolas JP, Morales R, Michot N, Vade I, Louboutin A, Perron S, Doerflinger G, Tric B, Monget S, Lengauer C, Schio L, Bioorg Med Chem Lett. 2012 Oct 15;22(20):6381-4. doi: 10.1016/j.bmcl.2012.08.072., Epub 2012 Aug 25. PMID:22981333

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (137 Kb) [Save to disk]

Biological Unit Coordinates (4g11.pdb1.gz) 132 Kb

LPC: Ligand-Protein Contacts for 4G11

CSU: Contacts of Structural Units for 4G11

Structure Factors (201 Kb)

Retrieve 4G11 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4G11 from S2C, [Save to disk]

Re-refined 4g11 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4G11 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4g11] [4g11_A]

SWISS-PROT database:

Domains found in 4G11: [PI3K_C2] [PI3K_rbd] [PI3Ka] [PI3Kc ] by SMART

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