4G50	Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase with surface mutation D44G from Burkholderia pseudomallei complexed with CJ168	date
authors	SSGCID, Seattle.Structural.Genomics.Center.for.Infectious.Disease.
compound		source
symmetry		R_factor R_Free 0.219
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.75
ligand	861, EDO, FMT	enzyme
Gene	BURPS1710B
Gene Ontology	Chain Function Process Component A, B peptidyl-prolyl cis-trans is...
Primary reference	A structural biology approach enables the development of antimicrobials targeting bacterial immunophilins., Begley DW, Fox D 3rd, Jenner D, Juli C, Pierce PG, Abendroth J, Muruthi M, Safford K, Anderson V, Atkins K, Barnes SR, Moen SO, Raymond AC, Stacy R, Myler PJ, Staker BL, Harmer NJ, Norville IH, Holzgrabe U, Sarkar-Tyson M, Edwards TE, Lorimer DD, Antimicrob Agents Chemother. 2014 Mar;58(3):1458-67. doi: 10.1128/AAC.01875-13., Epub 2013 Dec 23. PMID:24366729

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk] Biological Unit Coordinates (4g50.pdb1.gz) 63 Kb Biological Unit Coordinates (4g50.pdb2.gz) 61 Kb LPC: Ligand-Protein Contacts for 4G50 CSU: Contacts of Structural Units for 4G50 Structure Factors (461 Kb) Retrieve 4G50 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4G50 from S2C, [Save to disk] Re-refined 4g50 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4G50 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4G50

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4G50, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4g50_B] [4g50_A] [4g50] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4G50: [UBQ ] by SMART

Other resources with information on 4G50

Community annotation for 4G50 at PDBWiki (http://pdbwiki.org)

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