4G5X Crystal structures of N-acyl homoserine lactonase AidH date 2012-07-18
authors Liang, D.C., Yan, X.X., Gao, A.
compound source
symmetry
R_factor
R_Free 0.1579
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.29
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceHigh-resolution structures of AidH complexes provide insights into a novel catalytic mechanism for N-acyl homoserine lactonase., Gao A, Mei GY, Liu S, Wang P, Tang Q, Liu YP, Wen H, An XM, Zhang LQ, Yan XX, Liang DC, Acta Crystallogr D Biol Crystallogr. 2013 Jan;69(Pt 1):82-91. doi:, 10.1107/S0907444912042369. Epub 2012 Dec 20. PMID:23275166
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (219 Kb) [Save to disk]
  • Biological Unit Coordinates (4g5x.pdb1.gz) 107 Kb
  • Biological Unit Coordinates (4g5x.pdb2.gz) 109 Kb
  • CSU: Contacts of Structural Units for 4G5X
  • Structure Factors (1318 Kb)
  • Retrieve 4G5X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4G5X from S2C, [Save to disk]
  • Re-refined 4g5x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4G5X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4G5X
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4G5X, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4g5x_A] [4g5x] [4g5x_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4G5X
  • Community annotation for 4G5X at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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