4G7A The crystal structure of an alpha Carbonic Anhydrase from the extremophilic bacterium Sulfurihydrogenibium yellowstonense YO3AOP1 date 2012-07-20
authors Fiore, A.Di., Simone, G.De.
compound source
symmetry
R_factor
R_Free 0.2029
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand AZM, ZN enzyme
Gene SYO3AOP1
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceX-ray structure of the first `extremo-alpha-carbonic anhydrase', a dimeric enzyme from the thermophilic bacterium Sulfurihydrogenibium yellowstonense YO3AOP1., Di Fiore A, Capasso C, De Luca V, Monti SM, Carginale V, Supuran CT, Scozzafava A, Pedone C, Rossi M, De Simone G, Acta Crystallogr D Biol Crystallogr. 2013 Jun;69(Pt 6):1150-9. doi:, 10.1107/S0907444913007208. Epub 2013 May 16. PMID:23695259
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk]
  • Biological Unit Coordinates (4g7a.pdb1.gz) 87 Kb
  • LPC: Ligand-Protein Contacts for 4G7A
  • CSU: Contacts of Structural Units for 4G7A
  • Structure Factors (622 Kb)
  • Retrieve 4G7A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4G7A from S2C, [Save to disk]
  • Re-refined 4g7a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4G7A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4G7A
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4G7A, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4g7a_B] [4g7a_A] [4g7a]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4G7A: [Carb_anhydrase ] by SMART
  • Other resources with information on 4G7A
  • Community annotation for 4G7A at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science