4GDB		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	17O, EPE, MA4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structures of SHV-1 beta-lactamase with penem and penam sulfone inhibitors that form cyclic intermediates stabilized by carbonyl conjugation., Ke W, Pattanaik P, Bethel CR, Sheri A, Buynak JD, Bonomo RA, van den Akker F, PLoS One. 2012;7(11):e49035. doi: 10.1371/journal.pone.0049035. Epub 2012 Nov 8. PMID:23145056

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk] Biological Unit Coordinates (4gdb.pdb1.gz) 48 Kb LPC: Ligand-Protein Contacts for 4GDB CSU: Contacts of Structural Units for 4GDB Structure Factors (296 Kb) Retrieve 4GDB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4GDB from S2C, [Save to disk] Re-refined 4gdb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4GDB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4gdb] [4gdb_A] SWISS-PROT database:

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