4GDF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ZN	enzyme
Gene Ontology	Chain Function Process Component F, B, E, A
Primary reference	Mechanism of Origin DNA Recognition and Assembly of an Initiator-Helicase Complex by SV40 Large Tumor Antigen., Chang YP, Xu M, Machado AC, Yu XJ, Rohs R, Chen XS, Cell Rep. 2013 Mar 27. pii: S2211-1247(13)00109-5. doi:, 10.1016/j.celrep.2013.03.002. PMID:23545501

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (378 Kb) [Save to disk] Biological Unit Coordinates (4gdf.pdb1.gz) 188 Kb Biological Unit Coordinates (4gdf.pdb2.gz) 189 Kb LPC: Ligand-Protein Contacts for 4GDF CSU: Contacts of Structural Units for 4GDF Structure Factors (794 Kb) Retrieve 4GDF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4GDF from S2C, [Save to disk] Re-refined 4gdf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4GDF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4gdf] [4gdf_A] [4gdf_B] [4gdf_C] [4gdf_D] [4gdf_E] [4gdf_F] [4gdf_G] [4gdf_H] SWISS-PROT database:

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