4GG6 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


B, D


Primary referenceBiased T Cell Receptor Usage Directed against Human Leukocyte Antigen DQ8-Restricted Gliadin Peptides Is Associated with Celiac Disease., Broughton SE, Petersen J, Theodossis A, Scally SW, Loh KL, Thompson A, van Bergen J, Kooy-Winkelaar Y, Henderson KN, Beddoe T, Tye-Din JA, Mannering SI, Purcell AW, McCluskey J, Anderson RP, Koning F, Reid HH, Rossjohn J, Immunity. 2012 Oct 19;37(4):611-21. doi: 10.1016/j.immuni.2012.07.013. Epub 2012 , Oct 11. PMID:23063329
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (411 Kb) [Save to disk]
  • Biological Unit Coordinates (4gg6.pdb1.gz) 200 Kb
  • Biological Unit Coordinates (4gg6.pdb2.gz) 205 Kb
  • LPC: Ligand-Protein Contacts for 4GG6
  • CSU: Contacts of Structural Units for 4GG6
  • Structure Factors (463 Kb)
  • Retrieve 4GG6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GG6 from S2C, [Save to disk]
  • Re-refined 4gg6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4GG6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gg6] [4gg6_A] [4gg6_B] [4gg6_C] [4gg6_D] [4gg6_E] [4gg6_F] [4gg6_G] [4gg6_H] [4gg6_I] [4gg6_J]
  • SWISS-PROT database:
  • Domains found in 4GG6: [IG_like] [IGc1] [IGv] [MHC_II_alpha] [MHC_II_beta ] by SMART

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