4GIZ Crystal structure of full-length human papillomavirus oncoprotein E6 in complex with LXXLL peptide of ubiquitin ligase E6AP at 2.55 A resolution date
authors McEwen, A.G., Zanier, K., Charbonnier, S., Poussin, P., Cura, V., Pol, S.Vande., Trave, G., Cavarelli, J.
compound source
symmetry
R_factor
R_Free 0.1957
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.55
ligand GLC, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • carbohydrate transmembrane t...


    • D, C


    Primary referenceStructural basis for hijacking of cellular LxxLL motifs by papillomavirus E6 oncoproteins., Zanier K, Charbonnier S, Sidi AO, McEwen AG, Ferrario MG, Poussin-Courmontagne P, Cura V, Brimer N, Babah KO, Ansari T, Muller I, Stote RH, Cavarelli J, Vande Pol S, Trave G, Science. 2013 Feb 8;339(6120):694-8. doi: 10.1126/science.1229934. PMID:23393263
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (361 Kb) [Save to disk]
  • Biological Unit Coordinates (4giz.pdb1.gz) 179 Kb
  • Biological Unit Coordinates (4giz.pdb2.gz) 179 Kb
  • LPC: Ligand-Protein Contacts for 4GIZ
  • CSU: Contacts of Structural Units for 4GIZ
  • Structure Factors (489 Kb)
  • Retrieve 4GIZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GIZ from S2C, [Save to disk]
  • Re-refined 4giz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4GIZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4GIZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4GIZ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4giz_B] [4giz] [4giz_A] [4giz_C] [4giz_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4GIZ
  • Community annotation for 4GIZ at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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