OCA Atlas for 4GML

4GML

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
B, A, F, C, D, E

Primary reference

The structural basis for the interaction between the CAF1 nuclease and the NOT1 scaffold of the human CCR4-NOT deadenylase complex., Petit AP, Wohlbold L, Bawankar P, Huntzinger E, Schmidt S, Izaurralde E, Weichenrieder O, Nucleic Acids Res. 2012 Nov;40(21):11058-72. doi: 10.1093/nar/gks883. Epub 2012, Sep 12. PMID:22977175

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (225 Kb) [Save to disk]

Biological Unit Coordinates (4gml.pdb1.gz) 39 Kb

Biological Unit Coordinates (4gml.pdb2.gz) 39 Kb

Biological Unit Coordinates (4gml.pdb3.gz) 37 Kb

Biological Unit Coordinates (4gml.pdb4.gz) 39 Kb

Biological Unit Coordinates (4gml.pdb5.gz) 38 Kb

Biological Unit Coordinates (4gml.pdb6.gz) 39 Kb

CSU: Contacts of Structural Units for 4GML

Structure Factors (290 Kb)

Retrieve 4GML in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4GML from S2C, [Save to disk]

Re-refined 4gml structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4GML in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4gml] [4gml_A] [4gml_B] [4gml_C] [4gml_D] [4gml_E] [4gml_F]

SWISS-PROT database:

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