4GOD Crystal structure of the SGTA homodimerization domain date 2012-08-19
authors Chartron, J.W., VanderVelde, D.G., Clemons, W.M.
compound source
symmetry
R_factor
R_Free 0.2083
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.40
ligand MPD enzyme
Primary referenceStructures of the Sgt2/SGTA Dimerization Domain with the Get5/UBL4A UBL Domain Reveal an Interaction that Forms a Conserved Dynamic Interface., Chartron JW, Vandervelde DG, Clemons WM Jr, Cell Rep. 2012 Nov 7. pii: S2211-1247(12)00346-4. doi:, 10.1016/j.celrep.2012.10.010. PMID:23142665
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (22 Kb) [Save to disk]
  • Biological Unit Coordinates (4god.pdb1.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 4GOD
  • CSU: Contacts of Structural Units for 4GOD
  • Structure Factors (193 Kb)
  • Retrieve 4GOD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GOD from S2C, [Save to disk]
  • Re-refined 4god structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4GOD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4GOD
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4GOD, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4god_B] [4god] [4god_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4GOD
  • Community annotation for 4GOD at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science