4GOY The crystal structure of human fascin 1 K41A mutant date 2012-08-20
authors Yang, S.Y., Huang, F.K., Huang, J., Chen, S., Jakoncic, J., Leo-Macias, A., Diaz-Avalos, R., Chen, L., Zhang, J.J., Huang, X.Y.
compound source
symmetry
R_factor
R_Free 0.24501
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand BR, CL, DTT, GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMolecular Mechanism of Fascin Function in Filopodial Formation., Yang S, Huang FK, Huang J, Chen S, Jakoncic J, Leo-Macias A, Diaz-Avalos R, Chen L, Zhang JJ, Huang XY, J Biol Chem. 2012 Nov 26. PMID:23184945
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (323 Kb) [Save to disk]
  • Biological Unit Coordinates (4goy.pdb1.gz) 158 Kb
  • Biological Unit Coordinates (4goy.pdb2.gz) 162 Kb
  • Biological Unit Coordinates (4goy.pdb3.gz) 316 Kb
  • Biological Unit Coordinates (4goy.pdb4.gz) 320 Kb
  • LPC: Ligand-Protein Contacts for 4GOY
  • CSU: Contacts of Structural Units for 4GOY
  • Structure Factors (608 Kb)
  • Retrieve 4GOY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GOY from S2C, [Save to disk]
  • Re-refined 4goy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4GOY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4GOY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4GOY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4goy] [4goy_A] [4goy_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4GOY
  • Community annotation for 4GOY at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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