4GPM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceComputational design of self-assembling cyclic protein homo-oligomers., Fallas JA, Ueda G, Sheffler W, Nguyen V, McNamara DE, Sankaran B, Pereira JH, Parmeggiani F, Brunette TJ, Cascio D, Yeates TR, Zwart P, Baker D, Nat Chem. 2017 Apr;9(4):353-360. doi: 10.1038/nchem.2673. Epub 2016 Dec 5. PMID:28338692
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (4gpm.pdb1.gz) 49 Kb
  • Biological Unit Coordinates (4gpm.pdb2.gz) 49 Kb
  • CSU: Contacts of Structural Units for 4GPM
  • Structure Factors (669 Kb)
  • Retrieve 4GPM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GPM from S2C, [Save to disk]
  • Re-refined 4gpm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4GPM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gpm] [4gpm_A] [4gpm_B]
  • SWISS-PROT database:
  • Domain found in 4GPM: [ANK ] by SMART

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