4GPQ Structural insights into inhibition of the bivalent menin-MLL interaction by small molecules in leukemia date 2012-08-21
authors Shi, A., Murai, M.J., He, S., Lund, G.L., Hartley, T., Purohit, T., Reddy, G., Chruszcz, M., Grembecka, J., Cierpicki, T.
compound source
symmetry
R_factor
R_Free 0.17555
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.46
ligand EPE, PEG, PG4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural insights into inhibition of the bivalent menin-MLL interaction by small molecules in leukemia., Shi A, Murai MJ, He S, Lund G, Hartley T, Purohit T, Reddy G, Chruszcz M, Grembecka J, Cierpicki T, Blood. 2012 Aug 30. PMID:22936661
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (169 Kb) [Save to disk]
  • Biological Unit Coordinates (4gpq.pdb1.gz) 163 Kb
  • LPC: Ligand-Protein Contacts for 4GPQ
  • CSU: Contacts of Structural Units for 4GPQ
  • Structure Factors (1169 Kb)
  • Retrieve 4GPQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GPQ from S2C, [Save to disk]
  • Re-refined 4gpq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4GPQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4GPQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4GPQ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gpq_A] [4gpq]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4GPQ
  • Community annotation for 4GPQ at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science