4GQ0 Oxidoreductase date Aug 22, 2012
title Crystal Structure Of Akr1b10 Complexed With Nadp+ And Caffei Phenethyl Ester
authors Z.Liping, Z.Xuehua, C.Shangke, Z.Jing, H.Xiaopeng
compound source
Molecule: Aldo-Keto Reductase Family 1 Member B10
Chain: A
Synonym: Arl-1, Aldose Reductase-Like, Aldose Reductase-Rel Protein, Arp, Harp, Small Intestine Reductase, Si Reductase
Ec: 1.1.1.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Strain: Human
Gene: Akr1b10
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 61
R_factor 0.174 R_Free 0.225
length a length b length c angle alpha angle beta angle gamma
90.593 90.593 78.372 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.10 Å
ligand NAP, QAP enzyme Oxidoreductase E.C.1.1.1 BRENDA
note 4GQ0 supersedes 3V9Q

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (4gq0.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 4GQ0
  • CSU: Contacts of Structural Units for 4GQ0
  • Structure Factors (324 Kb)
  • Retrieve 4GQ0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GQ0 from S2C, [Save to disk]
  • Re-refined 4gq0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4GQ0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4GQ0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4GQ0, from MSDmotif at EBI
  • Fold representative 4gq0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gq0_A] [4gq0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4GQ0
  • Community annotation for 4GQ0 at PDBWiki (http://pdbwiki.org)

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