4GS7 Structure of the Interleukin-15 quaternary complex date 2012-08-27
authors Ring, A.M., Ozkan, E., Feng, D., Garcia, K.C.
compound source
symmetry
R_factor
R_Free 0.2268
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.35
ligand ACT, EDO, MLY, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


C, B


D


Primary referenceMechanistic and structural insight into the functional dichotomy between IL-2 and IL-15., Ring AM, Lin JX, Feng D, Mitra S, Rickert M, Bowman GR, Pande VS, Li P, Moraga I, Spolski R, Ozkan E, Leonard WJ, Garcia KC, Nat Immunol. 2012 Oct 28. doi: 10.1038/ni.2449. PMID:23104097
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (212 Kb) [Save to disk]
  • Biological Unit Coordinates (4gs7.pdb1.gz) 202 Kb
  • LPC: Ligand-Protein Contacts for 4GS7
  • CSU: Contacts of Structural Units for 4GS7
  • Structure Factors (148 Kb)
  • Retrieve 4GS7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4GS7 from S2C, [Save to disk]
  • Re-refined 4gs7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4GS7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4GS7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4GS7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4gs7_A] [4gs7_B] [4gs7_D] [4gs7_C] [4gs7]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4GS7: [CCP] [FN3 ] by SMART
    • Other resources with information on 4GS7
  • Community annotation for 4GS7 at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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