4GWM	Crystal structure of human promeprin beta	date
authors	Arolas, J.L., Broder, C., Jefferson, T., Guevara, T., Sterchi, E.E., Bode, W., Stocker, W., Becker-Pauly, C., Gomis-Ruth, F.X.
compound		source
symmetry		R_factor R_Free 0.1879
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.85
ligand	BMA, CL, FUC, GOL, MAN, NA, NAG, ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural basis for the sheddase function of human meprin beta metalloproteinase at the plasma membrane., Arolas JL, Broder C, Jefferson T, Guevara T, Sterchi EE, Bode W, Stocker W, Becker-Pauly C, Gomis-Ruth FX, Proc Natl Acad Sci U S A. 2012 Oct 2;109(40):16131-6. doi:, 10.1073/pnas.1211076109. Epub 2012 Sep 17. PMID:22988105

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (433 Kb) [Save to disk] Biological Unit Coordinates (4gwm.pdb1.gz) 422 Kb LPC: Ligand-Protein Contacts for 4GWM CSU: Contacts of Structural Units for 4GWM Structure Factors (867 Kb) Retrieve 4GWM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4GWM from S2C, [Save to disk] Re-refined 4gwm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4GWM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4GWM

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4GWM, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4gwm] [4gwm_A] [4gwm_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 4GWM: [MAM] [MATH] [ZnMc ] by SMART

Other resources with information on 4GWM

Community annotation for 4GWM at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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