OCA Atlas for 4GX8

4GX8

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, C, D, A

Primary reference

Proofreading exonuclease on a tether: the complex between the E. coli DNA polymerase III subunits alpha, {varepsilon}, theta and beta reveals a highly flexible arrangement of the proofreading domain., Ozawa K, Horan NP, Robinson A, Yagi H, Hill FR, Jergic S, Xu ZQ, Loscha KV, Li N, Tehei M, Oakley AJ, Otting G, Huber T, Dixon NE, Nucleic Acids Res. 2013 Apr 10. PMID:23580545

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (223 Kb) [Save to disk]

Biological Unit Coordinates (4gx8.pdb1.gz) 56 Kb

Biological Unit Coordinates (4gx8.pdb2.gz) 56 Kb

Biological Unit Coordinates (4gx8.pdb3.gz) 57 Kb

Biological Unit Coordinates (4gx8.pdb4.gz) 57 Kb

LPC: Ligand-Protein Contacts for 4GX8

CSU: Contacts of Structural Units for 4GX8

Structure Factors (1977 Kb)

Retrieve 4GX8 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4GX8 from S2C, [Save to disk]

Re-refined 4gx8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4GX8 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4gx8] [4gx8_A] [4gx8_B] [4gx8_C] [4gx8_D]

SWISS-PROT database:

Domain found in 4GX8: [POLIIIAc ] by SMART

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