4H2F Human ecto-5'-nucleotidase (CD73): crystal form I (open) in complex with adenosine date 2012-09-12
authors Straeter, N., Knapp, K.M., Zebisch, M., Pippel, J.
compound source
symmetry
R_factor
R_Free 0.17929
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.85
ligand ADN, CA, CL, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • 5'-nucleotidase activity


  • Primary referenceCrystal Structure of the Human Ecto-5'-Nucleotidase (CD73): Insights into the Regulation of Purinergic Signaling., Knapp K, Zebisch M, Pippel J, El-Tayeb A, Muller CE, Strater N, Structure. 2012 Nov 6. pii: S0969-2126(12)00375-9. doi:, 10.1016/j.str.2012.10.001. PMID:23142347
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (189 Kb) [Save to disk]
  • Biological Unit Coordinates (4h2f.pdb1.gz) 363 Kb
  • LPC: Ligand-Protein Contacts for 4H2F
  • CSU: Contacts of Structural Units for 4H2F
  • Structure Factors (983 Kb)
  • Retrieve 4H2F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4H2F from S2C, [Save to disk]
  • Re-refined 4h2f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4H2F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4H2F
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4H2F, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4h2f] [4h2f_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4H2F
  • Community annotation for 4H2F at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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