4H80 Oxidoreductase Oxidoreductase Inhibitor date Sep 21, 2012
title Crystal Structure Of Human Aldh3a1 With Its Isozyme Selectiv Inhibitor - N-[4-(4-Methylsulfonyl-2-Nitroanilino)Phenyl]Ac
authors T.D.Hurley, B.Parajuli
compound source
Molecule: Aldehyde Dehydrogenase, Dimeric Nadp-Preferring
Chain: A, B, C, D, E, F, G, H
Synonym: Aldhiii, Aldehyde Dehydrogenase 3, Aldehyde Dehydr Family 3 Member A1;
Ec: 1.2.1.5
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Aldh3, Aldh3a1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 1
R_factor 0.234 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
89.106 95.380 117.228 112.38 91.68 90.99
method X-Ray Diffractionresolution 2.50 Å
ligand 04T enzyme Oxidoreductase E.C.1.2.1.5 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1194 Kb) [Save to disk]
  • Biological Unit Coordinates (4h80.pdb1.gz) 303 Kb
  • Biological Unit Coordinates (4h80.pdb2.gz) 303 Kb
  • Biological Unit Coordinates (4h80.pdb3.gz) 301 Kb
  • Biological Unit Coordinates (4h80.pdb4.gz) 303 Kb
  • LPC: Ligand-Protein Contacts for 4H80
  • CSU: Contacts of Structural Units for 4H80
  • Structure Factors (1761 Kb)
  • Retrieve 4H80 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4H80 from S2C, [Save to disk]
  • Re-refined 4h80 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4H80 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4H80
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4H80, from MSDmotif at EBI
  • Fold representative 4h80 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4h80_H] [4h80_A] [4h80_G] [4h80] [4h80_C] [4h80_E] [4h80_F] [4h80_B] [4h80_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4H80
  • Community annotation for 4H80 at PDBWiki (http://pdbwiki.org)

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