4HE0 Hydrolase date Oct 03, 2012
title Crystal Structure Of Human Muscle Fructose-1,6-Bisphosphatas
authors R.Shi, D.W.Zhu, S.X.Lin
compound source
Molecule: Fructose-1,6-Bisphosphatase Isozyme 2
Chain: A
Synonym: Fbpase 2, D-Fructose-1,6-Bisphosphate 1-Phosphohyd
Ec: 3.1.3.11
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fbp2
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pkk223-3
symmetry Space Group: P 42 21 2
R_factor 0.200 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
73.853 73.853 146.749 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.69 Å
ligand CL, MG, PO4 enzyme Hydrolase E.C.3.1.3.11 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • phosphatase activity
  • fructose 1,6-bisphosphate 1-...


  • Primary referenceCrystal Structures of Human Muscle Fructose-1,6-Bisphosphatase: Novel Quaternary States, Enhanced AMP Affinity, and Allosteric Signal Transmission Pathway., Shi R, Chen ZY, Zhu DW, Li C, Shan Y, Xu G, Lin SX, PLoS One. 2013 Sep 27;8(9):e71242. PMID:24086250
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (4he0.pdb1.gz) 412 Kb
  • LPC: Ligand-Protein Contacts for 4HE0
  • CSU: Contacts of Structural Units for 4HE0
  • Structure Factors (92 Kb)
  • Retrieve 4HE0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HE0 from S2C, [Save to disk]
  • Re-refined 4he0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4HE0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4HE0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4HE0, from MSDmotif at EBI
  • Fold representative 4he0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4he0] [4he0_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4HE0
  • Community annotation for 4HE0 at PDBWiki (http://pdbwiki.org)

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