4HNJ Crystallographic structure of BCL-xL domain-swapped dimer in complex with PUMA BH3 peptide at 2.9A resolution date
authors Fisher, J.C., Yun, M.K., White, S.W.
compound source
symmetry
R_factor
R_Free 0.2536
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.90
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • negative regulation of prote...

    • C


    Primary referencePUMA binding induces partial unfolding within BCL-xL to disrupt p53 binding and promote apoptosis., Follis AV, Chipuk JE, Fisher JC, Yun MK, Grace CR, Nourse A, Baran K, Ou L, Min L, White SW, Green DR, Kriwacki RW, Nat Chem Biol. 2013 Jan 20. doi: 10.1038/nchembio.1166. PMID:23340338
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk]
  • Biological Unit Coordinates (4hnj.pdb1.gz) 99 Kb
  • CSU: Contacts of Structural Units for 4HNJ
  • Structure Factors (84 Kb)
  • Retrieve 4HNJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HNJ from S2C, [Save to disk]
  • Re-refined 4hnj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4HNJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4HNJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HNJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hnj_A] [4hnj_B] [4hnj] [4hnj_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4HNJ: [BCL] [BH4 ] by SMART
    • Other resources with information on 4HNJ
  • Community annotation for 4HNJ at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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