4HPY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
L


Primary referenceVaccine Induction of Antibodies against a Structurally Heterogeneous Site of Immune Pressure within HIV-1 Envelope Protein Variable Regions 1 and 2., Liao HX, Bonsignori M, Alam SM, McLellan JS, Tomaras GD, Moody MA, Kozink DM, Hwang KK, Chen X, Tsao CY, Liu P, Lu X, Parks RJ, Montefiori DC, Ferrari G, Pollara J, Rao M, Peachman KK, Santra S, Letvin NL, Karasavvas N, Yang ZY, Dai K, Pancera M, Gorman J, Wiehe K, Nicely NI, Rerks-Ngarm S, Nitayaphan S, Kaewkungwal J, Pitisuttithum P, Tartaglia J, Sinangil F, Kim JH, Michael NL, Kepler TB, Kwong PD, Mascola JR, Nabel GJ, Pinter A, Zolla-Pazner S, Haynes BF, Immunity. 2013 Jan 24;38(1):176-86. doi: 10.1016/j.immuni.2012.11.011. Epub 2013 , Jan 11. PMID:23313589
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (151 Kb) [Save to disk]
  • Biological Unit Coordinates (4hpy.pdb1.gz) 145 Kb
  • LPC: Ligand-Protein Contacts for 4HPY
  • CSU: Contacts of Structural Units for 4HPY
  • Structure Factors (1023 Kb)
  • Retrieve 4HPY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HPY from S2C, [Save to disk]
  • Re-refined 4hpy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4HPY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hpy] [4hpy_H] [4hpy_L] [4hpy_P]
  • SWISS-PROT database:
  • Domains found in 4HPY: [IG_like] [IGv ] by SMART

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