4HRD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand OV1 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, O

  • proteasome core complex, alp...
  • B, P

  • proteasome core complex, alp...
  • C, Q


    I, W
  • endopeptidase activator acti...

  • proteasome core complex, bet...
  • K, Y, H, V


    R, D

  • proteasome core complex, alp...
  • S, E

  • proteasome core complex, alp...
  • T, F


    U, G

  • proteasome core complex, alp...
  • X, J
  • endopeptidase activator acti...

  • proteasome core complex, bet...
  • Z, L


    a, M


    b, N

  • proteasome core complex, bet...
  • Primary referenceEnzyme inhibition by hydroamination: design and mechanism of a hybrid carmaphycin-syringolin enone proteasome inhibitor., Trivella DB, Pereira AR, Stein ML, Kasai Y, Byrum T, Valeriote FA, Tantillo DJ, Groll M, Gerwick WH, Moore BS, Chem Biol. 2014 Jun 19;21(6):782-91. doi: 10.1016/j.chembiol.2014.04.010. Epub, 2014 Jun 12. PMID:24930969
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2083 Kb) [Save to disk]
  • Biological Unit Coordinates (4hrd.pdb1.gz) 2070 Kb
  • LPC: Ligand-Protein Contacts for 4HRD
  • CSU: Contacts of Structural Units for 4HRD
  • Structure Factors (4065 Kb)
  • Retrieve 4HRD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HRD from S2C, [Save to disk]
  • Re-refined 4hrd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4HRD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hrd] [4hrd_A] [4hrd_B] [4hrd_C] [4hrd_D] [4hrd_E] [4hrd_F] [4hrd_G] [4hrd_H] [4hrd_I] [4hrd_J] [4hrd_K] [4hrd_L] [4hrd_M] [4hrd_N] [4hrd_O] [4hrd_P] [4hrd_Q] [4hrd_R] [4hrd_S] [4hrd_T] [4hrd_U] [4hrd_V] [4hrd_W] [4hrd_X] [4hrd_Y] [4hrd_Z] [4hrd_a] [4hrd_b]
  • SWISS-PROT database:
  • Domain found in 4HRD: [Proteasome_A_N ] by SMART

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