4HSV Crystal Structure of CXCL4L1 date 2012-10-30
authors Kuo, J.H., Liu, J.S., Wu, W.G., Sue, S.C.
compound source
symmetry
R_factor
R_Free 0.2784
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.08
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceAlternative C-Terminal Helix Orientation Alters Chemokine Function: Structure of the Anti-angiogenic Chemokine, CXCL4L1., Kuo JH, Chen YP, Liu JS, Dubrac A, Quemener C, Prats H, Bikfalvi A, Wu WG, Sue SC, J Biol Chem. 2013 Mar 27. PMID:23536183
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (4hsv.pdb1.gz) 82 Kb
  • CSU: Contacts of Structural Units for 4HSV
  • Structure Factors (228 Kb)
  • Retrieve 4HSV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HSV from S2C, [Save to disk]
  • Re-refined 4hsv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4HSV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4HSV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HSV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hsv_A] [4hsv] [4hsv_B] [4hsv_C] [4hsv_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4HSV: [SCY ] by SMART
  • Other resources with information on 4HSV
  • Community annotation for 4HSV at PDBWiki (http://pdbwiki.org)

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