4HU1 Crystal structure of human carbonic anhydrase isozyme XIII with the inhibitor. date 2012-11-02
authors Smirnov, A., Manakova, E., Grazulis, S.
compound source
symmetry
R_factor
R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.95
ligand EDO, PEG, V13, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary reference4-Substituted-2,3,5,6-tetrafluorobenzenesulfonamides as inhibitors of carbonic anhydrases I, II, VII, XII, and XIII., Dudutiene V, Zubriene A, Smirnov A, Gylyte J, Timm D, Manakova E, Grazulis S, Matulis D, Bioorg Med Chem. 2013 Apr 1;21(7):2093-106. doi: 10.1016/j.bmc.2013.01.008. Epub , 2013 Jan 16. PMID:23394791
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (4hu1.pdb1.gz) 49 Kb
  • Biological Unit Coordinates (4hu1.pdb2.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 4HU1
  • CSU: Contacts of Structural Units for 4HU1
  • Structure Factors (1538 Kb)
  • Retrieve 4HU1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HU1 from S2C, [Save to disk]
  • Re-refined 4hu1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4HU1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4HU1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HU1, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hu1] [4hu1_A] [4hu1_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4HU1: [Carb_anhydrase ] by SMART
    • Other resources with information on 4HU1
  • Community annotation for 4HU1 at PDBWiki (http://pdbwiki.org)

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