4HUS Crystal structure of streptogramin group A antibiotic acetyltransferase VatA from Staphylococcus aureus in complex with virginiamycin M1 date 2012-11-03
authors Stogios, P.J., Minasov, G., Evdokimova, E., Wawrzak, Z., Yim, V., Krishnamoorthy, M., Leo, R.Di., Courvalin, P., Savchenko, A., Anderson, W.F., CSGID, Center.for.Structural.Genomics.of.Infectious.Diseases.
compound source
symmetry
R_factor
R_Free 0.2284
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.36
ligand CL, EDO, NA, PEG, PGE, SO4, VIR enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referencePotential for reduction of streptogramin A resistance revealed by structural analysis of the VatA acetyltransferase., Stogios PJ, Kuhn ML, Evdokimova E, Courvalin P, Anderson WF, Savchenko A, Antimicrob Agents Chemother. 2014 Sep 15. pii: AAC.03743-14. PMID:25223995
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (233 Kb) [Save to disk]
  • Biological Unit Coordinates (4hus.pdb1.gz) 225 Kb
  • LPC: Ligand-Protein Contacts for 4HUS
  • CSU: Contacts of Structural Units for 4HUS
  • Structure Factors (284 Kb)
  • Retrieve 4HUS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HUS from S2C, [Save to disk]
  • Re-refined 4hus structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4HUS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4HUS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HUS, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hus_A] [4hus] [4hus_C] [4hus_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4HUS
  • Community annotation for 4HUS at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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