4HV3 Structure of Ricin A chain bound with N-(N-(pterin-7-yl)carbonyl-L-serinyl)-L-tryptophan date
authors Robertus, J.D., Manzano, L.A., Jasheway, K.R., Monzingo, A.F., Saito, R., Pruet, J.M., Wiget, P.A., Anslyn, E.V.
compound source
symmetry
R_factor
R_Free 0.23078
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.54
ligand 19L, MLA, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePeptide-Conjugated Pterins as Inhibitors of Ricin Toxin A., Saito R, Pruet JM, Manzano LA, Jasheway K, Monzingo AF, Wiget PA, Kamat I, Anslyn EV, Robertus JD, J Med Chem. 2012 Dec 19. PMID:23214944
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (4hv3.pdb1.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 4HV3
  • CSU: Contacts of Structural Units for 4HV3
  • Structure Factors (343 Kb)
  • Retrieve 4HV3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HV3 from S2C, [Save to disk]
  • Re-refined 4hv3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4HV3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4HV3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HV3, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hv3_A] [4hv3]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4HV3
  • Community annotation for 4HV3 at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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