4HYK Dbh Ternary Complex (substrates partially disordered) date 2012-11-13
authors Pata, J.D., Wilson, R.C.
compound source
symmetry
R_factor
R_Free 0.3134
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
Gene SACI
Gene
Ontology
ChainFunctionProcessComponent
A
  • DNA-directed DNA polymerase ...


  • Primary referenceY-Family Polymerase Conformation Is a Major Determinant of Fidelity and Translesion Specificity., Wilson RC, Jackson MA, Pata JD, Structure. 2012 Dec 11. pii: S0969-2126(12)00420-0. doi:, 10.1016/j.str.2012.11.005. PMID:23245850
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (132 Kb) [Save to disk]
  • Biological Unit Coordinates (4hyk.pdb1.gz) 126 Kb
  • CSU: Contacts of Structural Units for 4HYK
  • Structure Factors (95 Kb)
  • Retrieve 4HYK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4HYK from S2C, [Save to disk]
  • Re-refined 4hyk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4HYK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4HYK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4HYK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4hyk_A] [4hyk] [4hyk_P] [4hyk_T]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4HYK
  • Community annotation for 4HYK at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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