4I6X Crystal Structure of Non-catalyic Domain of Protein Disulfide Isomerase-related (PDIr) Protein date 2012-11-30
authors Kozlov, G., Vinaik, R., Gehring, K.
compound source
symmetry
R_factor
R_Free 0.23681
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
Primary referenceStructure of the Non-Catalytic Domain of the Protein Disulfide Isomerase-Related Protein (PDIR) Reveals Function in Protein Binding., Vinaik R, Kozlov G, Gehring K, PLoS One. 2013 Apr 16;8(4):e62021. doi: 10.1371/journal.pone.0062021. Print 2013. PMID:23614004
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (4i6x.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 4I6X
  • Structure Factors (276 Kb)
  • Retrieve 4I6X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4I6X from S2C, [Save to disk]
  • Re-refined 4i6x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4I6X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4I6X
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4I6X, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4i6x] [4i6x_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4I6X
  • Community annotation for 4I6X at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science