4I9Q date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, NA, XG4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • DNA-directed DNA polymerase ...
  • nuclease activity
  • exonuclease activity
  • 3'-5' exonuclease activity


  • Primary referenceA Remote Palm Domain Residue of RB69 DNA Polymerase Is Critical for Enzyme Activity and Influences the Conformation of the Active Site., Jacewicz A, Trzemecka A, Guja KE, Plochocka D, Yakubovskaya E, Bebenek A, Garcia-Diaz M, PLoS One. 2013 Oct 7;8(10):e76700. doi: 10.1371/journal.pone.0076700. PMID:24116139
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (641 Kb) [Save to disk]
  • Biological Unit Coordinates (4i9q.pdb1.gz) 316 Kb
  • Biological Unit Coordinates (4i9q.pdb2.gz) 321 Kb
  • LPC: Ligand-Protein Contacts for 4I9Q
  • CSU: Contacts of Structural Units for 4I9Q
  • Structure Factors (955 Kb)
  • Retrieve 4I9Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4I9Q from S2C, [Save to disk]
  • Re-refined 4i9q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4I9Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4i9q] [4i9q_A] [4i9q_B] [4i9q_C] [4i9q_D] [4i9q_P] [4i9q_T]
  • SWISS-PROT database:
  • Domain found in 4I9Q: [POLBc ] by SMART

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