4ICH Crystal structure of a putative TetR family transcriptional regulator from Saccharomonospora viridis DSM 43017 date
authors Filippova, E.V., Minasov, G., Shuvalova, L., Kiryukhina, O., Jedrzejczak, R., Joachimiak, A., Anderson, W.F., MCSG, Midwest.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.24705
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.95
ligand B3P, BME, BR, EDO, MSE enzyme
Gene SVIR
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (144 Kb) [Save to disk]
  • Biological Unit Coordinates (4ich.pdb1.gz) 137 Kb
  • LPC: Ligand-Protein Contacts for 4ICH
  • CSU: Contacts of Structural Units for 4ICH
  • Structure Factors (372 Kb)
  • Retrieve 4ICH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ICH from S2C, [Save to disk]
  • Re-refined 4ich structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ICH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ICH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ICH, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ich_B] [4ich_A] [4ich]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4ICH: [HTH_XRE ] by SMART
    • Other resources with information on 4ICH
  • Community annotation for 4ICH at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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