4IEH Crystal Structure of human Bcl-2 in complex with a small molecule inhibitor targeting Bcl-2 BH3 domain interactions date
authors Xie, X., Kulathila, R.
compound source
symmetry
R_factor
R_Free 0.2183
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
ligand 1E9 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe role of the acidity of N-heteroaryl sulfonamides as inhibitors of bcl-2 family protein-protein interactions., Toure BB, Miller-Moslin K, Yusuff N, Perez L, Dore M, Joud C, Michael W, DiPietro L, van der Plas S, McEwan M, Lenoir F, Hoe M, Karki R, Springer C, Sullivan J, Levine K, Fiorilla C, Xie X, Kulathila R, Herlihy K, Porter D, Visser M, ACS Med Chem Lett. 2013 Jan 4;4(2):186-90. doi: 10.1021/ml300321d. eCollection, 2013 Feb 14. PMID:24900652
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (4ieh.pdb1.gz) 28 Kb
  • LPC: Ligand-Protein Contacts for 4IEH
  • CSU: Contacts of Structural Units for 4IEH
  • Structure Factors (121 Kb)
  • Retrieve 4IEH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4IEH from S2C, [Save to disk]
  • Re-refined 4ieh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4IEH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4IEH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4IEH, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ieh_A] [4ieh]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4IEH: [BCL] [BH4 ] by SMART
    • Other resources with information on 4IEH
  • Community annotation for 4IEH at PDBWiki (http://pdbwiki.org)

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