4IFP X-ray Crystal Structure of Human NLRP1 CARD Domain date
authors Jin, T., Curry, J., Smith, P., Jiang, J., Xiao, T.
compound source
symmetry
R_factor
R_Free 0.2076
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.99
ligand GLC, MLI enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B
  • carbohydrate transmembrane t...


    • Primary referenceStructure of the NLRP1 caspase recruitment domain suggests potential mechanisms for its association with procaspase-1., Jin T, Curry J, Smith P, Jiang J, Xiao TS, Proteins. 2013 Mar 18. doi: 10.1002/prot.24287. PMID:23508996
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (250 Kb) [Save to disk]
  • Biological Unit Coordinates (4ifp.pdb1.gz) 84 Kb
  • Biological Unit Coordinates (4ifp.pdb2.gz) 83 Kb
  • Biological Unit Coordinates (4ifp.pdb3.gz) 84 Kb
  • LPC: Ligand-Protein Contacts for 4IFP
  • CSU: Contacts of Structural Units for 4IFP
  • Structure Factors (1299 Kb)
  • Retrieve 4IFP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4IFP from S2C, [Save to disk]
  • Re-refined 4ifp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4IFP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4IFP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4IFP, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ifp_B] [4ifp_A] [4ifp_C] [4ifp]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4IFP
  • Community annotation for 4IFP at PDBWiki (http://pdbwiki.org)

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