4IH3 2.5 Angstroms X-ray crystal structure of of human 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase in complex with dipicolinic acid date
authors Huo, L., Liu, A.
compound source
symmetry
R_factor
R_Free 0.2828
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.49
ligand PDC, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceHuman alpha-amino-beta-carboxymuconate-epsilon-semialdehyde decarboxylase (ACMSD): A structural and mechanistic unveiling., Huo L, Liu F, Iwaki H, Li T, Hasegawa Y, Liu A, Proteins. 2014 Nov 12. doi: 10.1002/prot.24722. PMID:25392945
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (324 Kb) [Save to disk]
  • Biological Unit Coordinates (4ih3.pdb1.gz) 109 Kb
  • Biological Unit Coordinates (4ih3.pdb2.gz) 110 Kb
  • Biological Unit Coordinates (4ih3.pdb3.gz) 109 Kb
  • LPC: Ligand-Protein Contacts for 4IH3
  • CSU: Contacts of Structural Units for 4IH3
  • Structure Factors (467 Kb)
  • Retrieve 4IH3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4IH3 from S2C, [Save to disk]
  • Re-refined 4ih3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4IH3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4IH3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4IH3, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ih3] [4ih3_B] [4ih3_F] [4ih3_C] [4ih3_E] [4ih3_A] [4ih3_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4IH3
  • Community annotation for 4IH3 at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science