4ILW Complex of matrix metalloproteinase-10 catalytic domain (MMP-10cd) with tissue inhibitor of metalloproteinases-2 (TIMP-2) date 2013-01-01
authors Batra, J., Soares, A.S., Radisky, E.S.
compound source
symmetry
R_factor
R_Free 0.26305
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
ligand CA, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


F, D


Primary referenceMatrix metalloproteinase-10/TIMP-2 structure and analyses define conserved core interactions and diverse exosite interactions in MMP/TIMP complexes., Batra J, Soares AS, Mehner C, Radisky ES, PLoS One. 2013 Sep 20;8(9):e75836. doi: 10.1371/journal.pone.0075836. PMID:24073280
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk]
  • Biological Unit Coordinates (4ilw.pdb1.gz) 57 Kb
  • Biological Unit Coordinates (4ilw.pdb2.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 4ILW
  • CSU: Contacts of Structural Units for 4ILW
  • Structure Factors (914 Kb)
  • Retrieve 4ILW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ILW from S2C, [Save to disk]
  • Re-refined 4ilw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ILW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ILW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ILW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ilw_D] [4ilw_F] [4ilw_B] [4ilw_A] [4ilw]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4ILW: [C345C] [NTR] [ZnMc ] by SMART
  • Other resources with information on 4ILW
  • Community annotation for 4ILW at PDBWiki (http://pdbwiki.org)

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