4IMZ Structural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus date 2013-01-03
authors Prasad, B.V.V., Muhaxhiri, Z., Deng, L., Shanker, S., Sankaran, B., Estes, M.K., Palzkill, T., Song, Y.
compound source
symmetry
R_factor
R_Free 0.194
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.70
ligand 1HB, NA, PHQ, SCN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus., Muhaxhiri Z, Deng L, Shanker S, Sankaran B, Estes MK, Palzkill T, Song Y, Prasad BV, J Virol. 2013 Jan 30. PMID:23365454
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (4imz.pdb1.gz) 120 Kb
  • LPC: Ligand-Protein Contacts for 4IMZ
  • CSU: Contacts of Structural Units for 4IMZ
  • Structure Factors (302 Kb)
  • Retrieve 4IMZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4IMZ from S2C, [Save to disk]
  • Re-refined 4imz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4IMZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4IMZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4IMZ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4imz_A] [4imz_B] [4imz]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4IMZ
  • Community annotation for 4IMZ at PDBWiki (http://pdbwiki.org)

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