4ISO Crystal Structure of Matriptase in complex with its inhibitor HAI-1 date
authors Huang, M.D., Zhao, B.Y., Yuan, C., Li, R.
compound source
symmetry
R_factor
R_Free 0.2187
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.01
ligand GOL, GSH, PEG, PGE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceCrystal structures of matriptase in complex with its inhibitor hepatocyte growth factor activator inhibitor-1., Zhao B, Yuan C, Li R, Qu D, Huang M, Ngo JC, J Biol Chem. 2013 Apr 19;288(16):11155-64. doi: 10.1074/jbc.M113.454611. Epub, 2013 Feb 26. PMID:23443661
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (4iso.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 4ISO
  • CSU: Contacts of Structural Units for 4ISO
  • Structure Factors (341 Kb)
  • Retrieve 4ISO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ISO from S2C, [Save to disk]
  • Re-refined 4iso structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ISO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ISO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ISO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4iso_A] [4iso_B] [4iso]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4ISO: [KU] [Tryp_SPc ] by SMART
  • Other resources with information on 4ISO
  • Community annotation for 4ISO at PDBWiki (http://pdbwiki.org)

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