4IVZ A Y37F mutant of C.Esp1396I bound to its highest affinity operator site OM date 2013-01-23
authors Martin, R.N.A., McGeehan, J.E., Kneale, G.G.
compound source
symmetry
R_factor
R_Free 0.21478
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.10
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B


Primary referenceStructural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I., Martin RN, McGeehan JE, Kneale G, PLoS One. 2014 Jun 2;9(6):e98365. doi: 10.1371/journal.pone.0098365. eCollection , 2014. PMID:24887147
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (4ivz.pdb1.gz) 42 Kb
  • Biological Unit Coordinates (4ivz.pdb2.gz) 42 Kb
  • CSU: Contacts of Structural Units for 4IVZ
  • Structure Factors (256 Kb)
  • Retrieve 4IVZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4IVZ from S2C, [Save to disk]
  • Re-refined 4ivz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4IVZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4IVZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4IVZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ivz] [4ivz_C] [4ivz_A] [4ivz_G] [4ivz_E] [4ivz_D] [4ivz_B] [4ivz_F] [4ivz_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4IVZ: [HTH_XRE ] by SMART
  • Other resources with information on 4IVZ
  • Community annotation for 4IVZ at PDBWiki (http://pdbwiki.org)

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