4J0W Structure of U3-55K date 2013-01-31
authors Zhang, L., Lin, J., Ye, K.
compound source
symmetry
R_factor
R_Free 0.23188
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.70
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and functional analysis of the U3 snoRNA binding protein Rrp9., Zhang L, Lin J, Ye K, RNA. 2013 May;19(5):701-11. doi: 10.1261/rna.037580.112. Epub 2013 Mar 18. PMID:23509373
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (4j0w.pdb1.gz) 54 Kb
  • CSU: Contacts of Structural Units for 4J0W
  • Structure Factors (546 Kb)
  • Retrieve 4J0W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4J0W from S2C, [Save to disk]
  • Re-refined 4j0w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4J0W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4J0W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4J0W, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4j0w] [4j0w_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4J0W: [WD40 ] by SMART
  • Other resources with information on 4J0W
  • Community annotation for 4J0W at PDBWiki (http://pdbwiki.org)

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